Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTGCATTAAAGAAGGATTAATAACTGCAGATGCAGA
(((((.((((((((((.....&.)))))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289004
GeneSymbolSLCO6A1
Binding site1612,1650
Score0.923
Seed0
Au0.603
Energy-20.3
Binding len18
Me-5.839
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end3
PositionCDS
2D Structure