Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACATGGAAACTGCATGCTGCC
..((((((((((((.......&.))))))).))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289007
GeneSymbolTMEM161B
Binding site1733,1754
Score0.923
Seed1
Au0.456
Energy-18.7
Binding len15
Me-5.925
Phylopstem4.999386923076923
Phylopflank4.868226459999999
Longest consecutive pairings7
Position of longest consecutive pairings7
Pairings in 3prime end1
Position3UTR
2D Structure