Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGCAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289023
GeneSymbolLAIR1
Binding site3138,3164
Score1.0
Seed0
Au0.426
Energy-22.1
Binding len26
Me-5.728
Phylopstem-0.0008820333333333374
Phylopflank-0.16655526462499992
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure