Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCAGCCTCCTGAGCAGCTGGGAT
((.((((((((((((..((((&)))))))))......))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289025
GeneSymbolLAIR1
Binding site3189,3215
Score0.923
Seed0
Au0.426
Energy-22.1
Binding len26
Me-5.728
Phylopstem-0.05100367777777778
Phylopflank0.04012916749999998
Longest consecutive pairings9
Position of longest consecutive pairings17
Pairings in 3prime end6
Position3UTR
2D Structure