Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTGGATTCCTCTTCATCTAGAAAGCCAGCCAGGCAGCTGTC
..(((((((((((((......&.)))))..)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289027
GeneSymbolLAIR1
Binding site1170,1215
Score0.846
Seed1
Au0.456
Energy-20.3
Binding len17
Me-5.19
Phylopstem-0.06915676666666667
Phylopflank-0.38174971874999997
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end2
Position3UTR
2D Structure