Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCTCACACAGCCGCAGCC
.....(((((((((((.((((&))))......))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289033
GeneSymbolSERPINA4
Binding site506,528
Score0.846
Seed0
Au0.353
Energy-21.9
Binding len22
Me-13.666
Phylopstem0.18445518181818182
Phylopflank0.9989743812499999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure