Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGCAGCCGCTGCC
.....((.(((((((((((((&)))).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289045
GeneSymbolPLAGL1
Binding site1839,1857
Score0.923
Seed0
Au0.294
Energy-22.2
Binding len18
Me-15.979
Phylopstem1.3040347071428573
Phylopflank2.33532626
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure