Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTATGCAGCCGCTGCC
.....((.(((((((((((((&)))).))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289046
GeneSymbolPLAGL1
Binding site1820,1838
Score0.923
Seed0
Au0.294
Energy-22.2
Binding len18
Me-15.979
Phylopstem1.4265553499999999
Phylopflank1.4117119362500001
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end8
PositionCDS
2D Structure