Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGTTGGGCTTCTGGCAGCTGCC
..((((((((((((...(((.&)))....))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289048
GeneSymbolPLAGL1
Binding site1872,1896
Score0.846
Seed1
Au0.397
Energy-20.2
Binding len24
Me-5.925
Phylopstem3.98298825
Phylopflank3.1467868612500003
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure