Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ATGTAACCACTGTAGTTGCAGA
(((((((((((((.((.(.((&)).).)).))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365053
GeneSymbolC9orf85
Binding site1858,1880
Score0.923
Seed1
Au0.618
Energy-19.5
Binding len22
Me-4.794
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure