Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAAGCAGCATAAGCTGCAC
.(((((((...(((((..((.&))...)))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289059
GeneSymbolSTK33
Binding site1517,1538
Score0.846
Seed1
Au0.529
Energy-18.7
Binding len21
Me-8.917
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure