Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCAAAGCAGCATAAGCTGCAC
.(((((((...(((((..((.&))...)))))...))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289061
GeneSymbolSTK33
Binding site2104,2125
Score0.846
Seed1
Au0.529
Energy-18.7
Binding len21
Me-8.917
Phylopstem-0.11234332857142858
Phylopflank0.39817990125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure