Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGAGAACAGCCGCAGCA
.....(((((((((((..(((&)))....))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289063
GeneSymbolLIG1
Binding site1214,1233
Score0.923
Seed0
Au0.309
Energy-23.9
Binding len19
Me-13.666
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure