Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&AAATCTGCTGTGGCAGGC
.((((.((((....((((((((&)))))))))))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001289064
GeneSymbolLIG1
Binding site2795,2813
Score0.846
Seed0
Au0.515
Energy-17.6
Binding len18
Me-14.012
Phylopstem-0.21230749999999998
Phylopflank0.3766964787500001
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end8
Position3UTR
2D Structure