Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTTCCCGGCGCCGGCAGCTGCT
..((((((((((.(((..((.&.)).)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289064
GeneSymbolLIG1
Binding site1978,2002
Score0.923
Seed1
Au0.324
Energy-22.6
Binding len19
Me-6.246
Phylopstem3.1262503636363634
Phylopflank3.1722722825
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure