Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGGGCATTAATCTGACTGCAGCA
.....(((((((((((.((((&))))..)))........)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289068
GeneSymbolHELLS
Binding site2121,2147
Score0.846
Seed0
Au0.559
Energy-17.8
Binding len26
Me-13.666
Phylopstem5.644216773684211
Phylopflank5.461523805
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure