Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATGATCGAAAGTGGTTGTT
..(((((((((((((((((((&)))))))))))....)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289078
GeneSymbolDCLRE1C
Binding site3944,3968
Score0.846
Seed1
Au0.662
Energy-18.9
Binding len24
Me-4.957
Phylopstem0.8258948043478263
Phylopflank1.7193303362499999
Longest consecutive pairings11
Position of longest consecutive pairings13
Pairings in 3prime end8
Position3UTR
2D Structure