Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTGCTATGCAGACCTGACCCTGCAGCTGG
...(((((((((..((.((((&.)))).)).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289083
GeneSymbolCD300LF
Binding site707,740
Score0.923
Seed0
Au0.353
Energy-21.5
Binding len19
Me-8.661
Phylopstem0.5443354666666667
Phylopflank-0.23870616
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure