Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATCGACCGTCTGCC
..((((..(((((((..((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289083
GeneSymbolCD300LF
Binding site1024,1043
Score0.846
Seed0
Au0.338
Energy-18.5
Binding len19
Me-9.047
Phylopstem0.9027654142857143
Phylopflank0.10501733499999999
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure