Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTCATCGACCGTCTGCC
..((((..(((((((..((((&))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289084
GeneSymbolCD300LF
Binding site1023,1042
Score0.846
Seed0
Au0.338
Energy-18.5
Binding len19
Me-9.047
Phylopstem1.2825877
Phylopflank0.09223492250000004
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure