Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTCTTTCTACGACCGCGTCTGGGC
.(.(((.((((((((((((((&)))).....)))))))))).))).).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289103
GeneSymbolPRKCSH
Binding site948,974
Score0.877
Seed0
Au0.368
Energy-21.5
Binding len26
Me-6.895
Phylopstem3.0361356473684213
Phylopflank3.0277646375000007
Longest consecutive pairings10
Position of longest consecutive pairings7
Pairings in 3prime end8
PositionCDS
2D Structure