Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCTGCTGCAGCTGG
...((((((((((.((.....&)).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289110
GeneSymbolRNASE9
Binding site215,229
Score0.846
Seed0
Au0.471
Energy-20.1
Binding len14
Me-7.371
Phylopstem-0.37476357200000004
Phylopflank-0.18081923799999997
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure