Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGCTGCAGCTGA
...(((((((((((((.....&))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289122
GeneSymbolLIMCH1
Binding site1041,1055
Score0.846
Seed0
Au0.382
Energy-23.8
Binding len14
Me-6.515
Phylopstem4.4573146153846155
Phylopflank4.8520308199999995
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure