Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGATCTGTTTAACCCATGCCAGGC
.((((((((......(((((((&)))))))........)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001289136
GeneSymbolSLIT2
Binding site6116,6140
Score0.846
Seed1
Au0.471
Energy-16.8
Binding len24
Me-14.089
Phylopstem4.91566575
Phylopflank4.051267806249999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure