Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTCCACCCCGCGGCGCAGG
((((.(((((((.((.((((.&)))).))..))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289148
GeneSymbolVPS33B
Binding site340,361
Score0.846
Seed0
Au0.338
Energy-21.7
Binding len21
Me-9.579
Phylopstem0.0494014
Phylopflank0.07642518
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure