Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATTTGCAGCTGTG
..((((((((((.(((.....&))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289154
GeneSymbolMICA
Binding site1119,1134
Score0.846
Seed1
Au0.625
Energy-19.4
Binding len15
Me-6.246
Phylopstem0.21291174489999998
Phylopflank-0.08574017566249999
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure