Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGACAACCGCATCTCACAGAAGACCCTAAGCCAGTGGATTGCTGA
...(((((((((((((((((.&))))).)))))))).............................)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289155
GeneSymbolMPI
Binding site214,262
Score0.827
Seed0
Au0.456
Energy-21.3
Binding len48
Me-6.515
Phylopstem3.1868577319148934
Phylopflank4.4258669162499995
Longest consecutive pairings8
Position of longest consecutive pairings34
Pairings in 3prime end7
PositionCDS
2D Structure