Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGCAATCGTAGATCCTGTC
..((((((((((((((.((((&))))))))))))))...)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289157
GeneSymbolMPI
Binding site2606,2628
Score0.923
Seed1
Au0.5
Energy-20.1
Binding len22
Me-4.957
Phylopstem-0.17802105294117646
Phylopflank-0.0010374737499999759
Longest consecutive pairings14
Position of longest consecutive pairings8
Pairings in 3prime end7
Position3UTR
2D Structure