Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TGCAGTACAGTGCCAGGG
.((((((((....((((.....&)))).....)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001289396
GeneSymbolSMARCA2
Binding site2280,2298
Score0.846
Seed1
Au0.456
Energy-17.7
Binding len18
Me-12.497
Phylopstem2.4694706125000003
Phylopflank4.99544585375
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure