Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAACAGCAGCCGCAGCAGCAGC
((((.(((((((((((.....&.))))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289396
GeneSymbolSMARCA2
Binding site913,936
Score1.0
Seed0
Au0.353
Energy-26.0
Binding len18
Me-8.057
Phylopstem0.6836980545454545
Phylopflank0.90020989375
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end3
PositionCDS
2D Structure