Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTGATAGCCGGCCTGCTGA
...((((..(((((((.(((.&))).)))))))....)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289400
GeneSymbolSMARCA2
Binding site589,609
Score0.923
Seed0
Au0.5
Energy-16.2
Binding len20
Me-9.885
Phylopstem4.691720000000001
Phylopflank6.1199861262500015
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure