Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTCAGCCACAGCTCAT
.((.(((((.(((((.(((((&)))))))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289402
GeneSymbolZNF135
Binding site1509,1528
Score0.846
Seed0
Au0.456
Energy-22.4
Binding len19
Me-8.301
Phylopstem2.5126694
Phylopflank0.22863707125000005
Longest consecutive pairings10
Position of longest consecutive pairings9
Pairings in 3prime end7
PositionCDS
2D Structure