Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTTACAGCCCGGCTCAT
.((.(((((.(((((((((((&)))))))))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289403
GeneSymbolMMS19
Binding site2364,2383
Score0.846
Seed0
Au0.426
Energy-25.7
Binding len19
Me-8.068
Phylopstem4.914074909090909
Phylopflank4.418228458249999
Longest consecutive pairings18
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure