Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCAGGCAGCTGCAGGTGCAT
.((((.((((((((((...((&))..)))))))))).)))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289405
GeneSymbolMMS19
Binding site1231,1251
Score0.846
Seed0
Au0.353
Energy-23.7
Binding len20
Me-5.694
Phylopstem3.34410388
Phylopflank3.1261236525000005
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end5
PositionCDS
2D Structure