Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&TCTTATGAAAATAATAAAACAGATGTTTCCGCAGCTGACAT
.(((((((((((((((((((.&))))))))....................))))))))).)).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289409
GeneSymbolPMS1
Binding site910,951
Score0.923
Seed1
Au0.662
Energy-20.9
Binding len41
Me-3.793
Phylopstem1.8037017159999997
Phylopflank2.7484316702500005
Longest consecutive pairings9
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure