Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCAGTGGTGGTTGTGAC
((((((((((.(((((.((((&))))))))).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289759
GeneSymbolIFIT3
Binding site1717,1738
Score0.923
Seed1
Au0.426
Energy-18.8
Binding len21
Me-6.762
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end7
Position3UTR
2D Structure