Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACAACTGGACCCAAAGAGCAGCTGCAC
.(((((((((((((((.....&))))))...........))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289862
GeneSymbolPER3
Binding site838,865
Score1.0
Seed1
Au0.515
Energy-21.0
Binding len27
Me-3.793
Phylopstem1.7200857692307694
Phylopflank2.49419806275
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure