Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCAGACAGCAGCAGCTCGAA
(((.((((((.(((((..(((&)))..))))).))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289862
GeneSymbolPER3
Binding site2528,2549
Score0.923
Seed0
Au0.294
Energy-21.8
Binding len21
Me-9.794
Phylopstem0.038324233333333325
Phylopflank0.4846037750000001
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure