Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGCCCGAGTGGAGTCAGCTCAGTCCCGGCAGCCGCCGCGCGAG
((((.((.((((((((..((.&.)).)))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289912
GeneSymbolTPTEP2-CSNK1E
Binding site405,451
Score0.846
Seed0
Au0.279
Energy-23.0
Binding len20
Me-10.37
Phylopstem0.0
Phylopflank0.0
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end5
Position5UTR
2D Structure