Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCCGGCACTGCCAGCTGTT
..((((((((((.(((..(((&)))..))))))).)))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001365128
GeneSymbolNUP98
Binding site4839,4859
Score0.846
Seed1
Au0.426
Energy-19.1
Binding len20
Me-6.246
Phylopstem5.916070663636364
Phylopflank4.8328795625000005
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure