Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTTGAGTCCCGGCTGCAGC
(((((((((.((...(((((.&)))))...))))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289934
GeneSymbolLRCH4
Binding site1669,1689
Score0.846
Seed1
Au0.294
Energy-22.5
Binding len20
Me-8.062
Phylopstem2.6188373333333335
Phylopflank2.5106753975
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure