Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GGACATGCTCCGCCACCTCTACCAGGGCTGCCAGGTG
((((((((..(...(((((...&.)))))...)..)))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001289936
GeneSymbolERBB2
Binding site655,692
Score0.846
Seed1
Au0.382
Energy-21.2
Binding len21
Me-11.729
Phylopstem2.0995870125
Phylopflank4.36931265125
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure