Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTGGGAATGGGGGCAGCCAAGGGGCTGCAAA
((((((((.(((((((.....&.))))))..).)))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289936
GeneSymbolERBB2
Binding site3792,3825
Score0.878
Seed1
Au0.368
Energy-22.5
Binding len20
Me-4.994
Phylopstem1.1668205375
Phylopflank1.2805985187500002
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end3
PositionCDS
2D Structure