Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCGGAGCCGCAGTGAGCAC
.(((.(((((((((....(((&)))..)))))))))..))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289937
GeneSymbolERBB2
Binding site154,174
Score0.846
Seed0
Au0.265
Energy-22.0
Binding len20
Me-8.881
Phylopstem0.8494891666666667
Phylopflank0.9977145412499997
Longest consecutive pairings9
Position of longest consecutive pairings6
Pairings in 3prime end4
Position5UTR
2D Structure