Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCCTGCGGGAGCTGCAGCTTCGAA
(((.((((((((((...((((&)))).....)))))))))).))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289938
GeneSymbolERBB2
Binding site882,906
Score0.846
Seed0
Au0.353
Energy-21.9
Binding len24
Me-7.938
Phylopstem3.4103263
Phylopflank1.84200460125
Longest consecutive pairings10
Position of longest consecutive pairings5
Pairings in 3prime end5
PositionCDS
2D Structure