Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&GCATCACAGCCACAGCTGCC
..(((((((.((((((...((&))...)))))).))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289939
GeneSymbolSLC1A3
Binding site1375,1395
Score0.846
Seed1
Au0.5
Energy-23.1
Binding len20
Me-6.2
Phylopstem4.154757285714286
Phylopflank4.381596125
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure