Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&ACCTTATAATTGTAGCCAGTGTGGG
(((((((((((((((((((((&))))))))))))))))...))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289972
GeneSymbolZNF84
Binding site1362,1387
Score0.923
Seed1
Au0.559
Energy-22.2
Binding len25
Me-3.938
Phylopstem0.8952026249999999
Phylopflank0.1908982925
Longest consecutive pairings16
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure