Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&GAATTGTTTGTGGGGGGTGTGCCAGGC
.((((((((((..(.((.(...&.).)).)..)))))))))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001289984
GeneSymbolJADE2
Binding site5754,5781
Score0.974
Seed1
Au0.456
Energy-20.1
Binding len20
Me-9.165
Phylopstem-0.14367380000000002
Phylopflank-0.029125783750000023
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end3
Position3UTR
2D Structure