Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACCTGGCATACAATGTAGATTT&TCTGCAAGGAATGCACAGGC
.((((((((.(..((((((...&))))))..).)))).)))).
Details
MiRNAhsa-miR-221-5p
RefseqIDNM_001289984
GeneSymbolJADE2
Binding site1279,1299
Score0.846
Seed1
Au0.412
Energy-18.6
Binding len20
Me-9.672
Phylopstem3.9026355555555554
Phylopflank4.93541004875
Longest consecutive pairings6
Position of longest consecutive pairings14
Pairings in 3prime end5
PositionCDS
2D Structure