Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCAGCTGCGGTTGTAAGGT&CCTGCGCAAGCAGCGGCTGCAGC
(((((((((((.((((.(((.&)))..)))).).)))))))))).
Details
MiRNAhsa-miR-5047
RefseqIDNM_001289984
GeneSymbolJADE2
Binding site1514,1537
Score0.923
Seed1
Au0.397
Energy-25.4
Binding len23
Me-7.284
Phylopstem4.236166583333333
Phylopflank2.9274255800000004
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure